Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-1P43699 SNRPCP6-201ENST00000528310 210 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC5.26□□□□□ -1.57
NKX2-1P43699 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-1P43699 AC090651.1-201ENST00000567865 634 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 RN7SL689P-201ENST00000577215 297 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.26□□□□□ -1.57
NKX2-1P43699 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-1P43699 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-1P43699 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AC009237.12-201ENST00000604755 742 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AL136370.1-201ENST00000608166 691 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AC084036.1-201ENST00000609190 508 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 MIR6726-201ENST00000613751 61 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AC091059.2-201ENST00000623355 614 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AC008626.2-201ENST00000624425 248 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AC022726.2-201ENST00000634673 547 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
NKX2-1P43699 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NKX2-1P43699 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 AL359976.1-201ENST00000418655 3528 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 CASC19-238ENST00000641523 1558 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-1P43699 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC092111.2-201ENST00000611627 1414 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 OR51C1P-202ENST00000641159 1444 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC023886.2-201ENST00000321285 411 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 RNA5SP114-201ENST00000363780 113 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 U3.43-201ENST00000410734 213 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-1P43699 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC007562.1-201ENST00000421819 517 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 RPS10P21-201ENST00000430654 475 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC009518.3-201ENST00000438972 253 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 RPL29P7-201ENST00000440227 457 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC023274.2-201ENST00000445264 521 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AL445687.2-201ENST00000458156 728 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC128716.1-201ENST00000475129 166 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AC005017.1-201ENST00000482002 490 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AOX3P-204ENST00000491025 2107 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 OR9N1P-201ENST00000491296 333 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 RNA5SP318-201ENST00000516352 92 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.25□□□□□ -1.57
NKX2-1P43699 PSMC1P8-201ENST00000536820 1296 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AL445383.1-201ENST00000554689 874 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AL121579.2-201ENST00000555466 590 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC074141.1-201ENST00000588129 2995 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AP001267.4-201ENST00000602598 545 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 AC106782.7-201ENST00000624024 418 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 AC133555.5-201ENST00000624430 418 ntBASIC5.25□□□□□ -1.57
NKX2-1P43699 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-1P43699 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
NKX2-1P43699 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-1P43699 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-1P43699 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NKX2-1P43699 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms