Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 OSTCP4-201ENST00000424397 449 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 CXCR2P1-202ENST00000443392 1074 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AL133351.3-201ENST00000454998 193 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AP003385.3-201ENST00000472498 287 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 RPS7P11-201ENST00000484240 586 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 Y_RNA.710-201ENST00000516975 110 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 OR6M2P-201ENST00000529831 871 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AP001858.2-201ENST00000536213 601 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 MRPS21P9-201ENST00000571150 257 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AC025283.1-201ENST00000572039 734 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AC026898.1-201ENST00000586404 571 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AL591167.1-201ENST00000607321 456 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 MIR6883-201ENST00000614952 78 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AC069234.4-201ENST00000621276 412 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 RNA5SP346-201ENST00000363541 121 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 VIM2P-201ENST00000402383 1294 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 RPS26P38-201ENST00000414476 348 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC245884.2-201ENST00000426257 404 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AL731534.1-201ENST00000434711 269 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC128677.1-201ENST00000436016 442 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 PPIAP10-201ENST00000438675 458 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AL031681.1-201ENST00000443304 400 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 WDR82P2-201ENST00000444540 928 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 RARRES2P3-201ENST00000457739 473 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 RPL12P31-201ENST00000478433 450 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 RN7SL502P-201ENST00000481857 290 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 SNX18P24-201ENST00000505249 671 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC093816.1-201ENST00000515076 913 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC079248.1-201ENST00000427568 1546 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC217777.1-201ENST00000570034 1471 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 VN2R1P-201ENST00000449668 1743 ntBASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.57□□□□□ -1.52
TRAV27A0A087WT01 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 DNM1P47-203ENST00000571780 12667 ntBASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 CASC19-246ENST00000641625 1606 ntBASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 RPL11P4-201ENST00000332269 436 ntBASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 YWHAZP4-201ENST00000392459 708 ntBASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 AL157702.1-201ENST00000398764 426 ntBASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.56□□□□□ -1.52
TRAV27A0A087WT01 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms