Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 RN7SKP189-201ENST00000365042 330 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 RNA5SP187-201ENST00000384400 119 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 RN7SKP296-201ENST00000411185 341 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 RPS7P12-201ENST00000422385 582 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 RPS10P21-201ENST00000430654 475 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 FECHP1-201ENST00000431896 1214 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AL590128.1-201ENST00000433407 286 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 CARSP2-201ENST00000520688 277 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AP001994.1-201ENST00000527539 826 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AL031429.2-201ENST00000602605 649 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AC027334.1-201ENST00000603257 310 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AL136984.1-201ENST00000607611 1893 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC024937.2-201ENST00000411669 1242 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 OR52S1P-201ENST00000427016 937 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 RPS3AP38-201ENST00000435889 763 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC013403.1-201ENST00000436954 263 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC092967.1-201ENST00000449016 481 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 ST13P21-201ENST00000453250 1098 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 RPS27AP3-201ENST00000453803 454 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 OR4A43P-201ENST00000532938 908 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC091932.1-201ENST00000569381 427 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC027216.1-201ENST00000577726 685 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC004890.3-201ENST00000605566 1095 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AC005277.2-201ENST00000617898 390 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 MIR6829-201ENST00000620375 67 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AP001264.1-201ENST00000620602 703 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 MRPL57P1-201ENST00000621486 265 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 TCP11X1-202ENST00000622971 1372 ntBASIC5.66□□□□□ -1.5
HMG20AQ9NP66 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMG20AQ9NP66 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms