Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC069282.1-201ENST00000411911 526 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 THEM7P-201ENST00000419556 672 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 RBMY2HP-201ENST00000457961 720 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC112198.4-201ENST00000515450 351 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 OR56A7P-201ENST00000524865 941 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 OR9G2P-201ENST00000533326 880 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AP001804.2-201ENST00000533932 910 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 UBTFL9-201ENST00000534504 1148 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC015818.6-201ENST00000584274 634 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 NDUFB9P1-201ENST00000604683 510 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC016597.2-201ENST00000613256 341 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 CDY5P-201ENST00000411487 1580 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 CDY9P-201ENST00000451397 1580 ntBASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 RNU6-316P-201ENST00000391027 107 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 RPL9P21-201ENST00000392269 505 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 SFR1P2-201ENST00000421841 730 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC002069.1-201ENST00000429649 1159 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 MRPL50P1-201ENST00000431951 384 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 NPM1P23-201ENST00000440193 849 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 SDHCP3-201ENST00000445371 506 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 RN7SL568P-201ENST00000493069 298 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 GOLGA5P1-201ENST00000507317 980 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AF129408.1-201ENST00000608767 431 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC104763.3-201ENST00000613765 618 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AP005212.3-201ENST00000619964 528 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms