Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RPL5P20-201ENST00000403848 896 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.29□□□□□ -1.4
HNF4AP41235 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.29□□□□□ -1.4
HNF4AP41235 VN1R3-201ENST00000418822 919 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 AC234771.4-201ENST00000441416 730 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 VN1R38P-201ENST00000450265 887 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 CCNJP2-201ENST00000457810 1163 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.29□□□□□ -1.4
HNF4AP41235 RPL19P11-201ENST00000495944 589 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.29□□□□□ -1.4
HNF4AP41235 MINOS1P4-201ENST00000515470 318 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 AC113191.1-201ENST00000517759 403 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.29□□□□□ -1.4
HNF4AP41235 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.29□□□□□ -1.4
HNF4AP41235 OR9G2P-201ENST00000533326 880 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.29□□□□□ -1.4
HNF4AP41235 AC005519.1-201ENST00000554490 601 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.29□□□□□ -1.4
HNF4AP41235 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.29□□□□□ -1.4
HNF4AP41235 AC012175.1-201ENST00000603755 531 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 QTRT1P1-201ENST00000604344 1078 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.29□□□□□ -1.4
HNF4AP41235 MRPL57P1-201ENST00000621486 265 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.29□□□□□ -1.4
HNF4AP41235 CASC19-238ENST00000641523 1558 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HNF4AP41235 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HNF4AP41235 AC105235.1-201ENST00000623208 1816 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.29□□□□□ -1.4
HNF4AP41235 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
HNF4AP41235 MSL3P1-202ENST00000440028 1468 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 OR11H13P-201ENST00000359695 979 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HNF4AP41235 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.28□□□□□ -1.4
HNF4AP41235 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.28□□□□□ -1.4
HNF4AP41235 AL589794.1-201ENST00000424971 390 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 AC097721.1-201ENST00000427150 1253 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.28□□□□□ -1.4
HNF4AP41235 OR6C71P-201ENST00000432580 913 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 AC092106.2-201ENST00000436597 487 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.28□□□□□ -1.4
HNF4AP41235 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.28□□□□□ -1.4
HNF4AP41235 MTCO3P17-201ENST00000443775 513 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 AL034369.1-201ENST00000453808 477 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 CTSLP6-201ENST00000458273 1002 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 RPL5P14-201ENST00000494197 878 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.28□□□□□ -1.4
HNF4AP41235 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.28□□□□□ -1.4
HNF4AP41235 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.28□□□□□ -1.4
HNF4AP41235 RNU4-18P-201ENST00000516751 149 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.28□□□□□ -1.4
HNF4AP41235 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.28□□□□□ -1.4
HNF4AP41235 AC008126.1-201ENST00000549019 480 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 RN7SL66P-201ENST00000582099 264 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 AC011497.2-201ENST00000600255 639 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.28□□□□□ -1.4
HNF4AP41235 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.28□□□□□ -1.4
HNF4AP41235 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.28□□□□□ -1.4
HNF4AP41235 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HNF4AP41235 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.28□□□□□ -1.4
HNF4AP41235 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HNF4AP41235 TTC41P-205ENST00000551270 3963 ntBASIC6.28□□□□□ -1.4
HNF4AP41235 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HNF4AP41235 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
HNF4AP41235 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HNF4AP41235 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
HNF4AP41235 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
HNF4AP41235 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.27□□□□□ -1.41
HNF4AP41235 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HNF4AP41235 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HNF4AP41235 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HNF4AP41235 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HNF4AP41235 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
HNF4AP41235 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HNF4AP41235 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HNF4AP41235 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms