Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 RNA5SP114-201ENST00000363780 113 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFSF4P23510 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.03□□□□□ -1.44
TNFSF4P23510 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 HMGB3P19-201ENST00000403971 560 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 RPL5P19-201ENST00000404228 893 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AL096711.1-201ENST00000404780 554 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AL355615.1-201ENST00000406187 641 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 SOD1P1-201ENST00000407803 440 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AL773545.3-201ENST00000414297 706 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AC008173.1-201ENST00000418901 264 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 PUDPP2-201ENST00000431423 643 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AL158214.1-201ENST00000444423 404 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 RPL21P33-201ENST00000444831 484 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.03□□□□□ -1.44
TNFSF4P23510 CST12P-201ENST00000457644 362 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 RPS20P4-201ENST00000461659 355 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 RPS17P11-201ENST00000474297 293 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 OR5M6P-201ENST00000530227 937 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AC087894.1-201ENST00000538359 518 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AGGF1P9-201ENST00000561884 913 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 LINC00556-201ENST00000569603 412 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.03□□□□□ -1.44
TNFSF4P23510 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.03□□□□□ -1.44
TNFSF4P23510 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AC245100.7-201ENST00000609678 442 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AC009283.1-201ENST00000615852 645 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AC093909.6-201ENST00000624757 775 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AC004808.1-201ENST00000627671 721 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 AL596275.2-208ENST00000641192 594 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 VPS35P1-201ENST00000563400 1518 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFSF4P23510 MAPK10-261ENST00000641050 3109 ntBASIC6.03□□□□□ -1.44
TNFSF4P23510 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
TNFSF4P23510 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFSF4P23510 AL356361.1-201ENST00000400943 1459 ntBASIC6.02□□□□□ -1.44
TNFSF4P23510 AL353743.3-201ENST00000442109 1468 ntBASIC6.02□□□□□ -1.44
TNFSF4P23510 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.02□□□□□ -1.44
TNFSF4P23510 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFSF4P23510 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.02□□□□□ -1.45
TNFSF4P23510 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.02□□□□□ -1.45
TNFSF4P23510 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.02□□□□□ -1.45
TNFSF4P23510 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFSF4P23510 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFSF4P23510 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
TNFSF4P23510 NCOA4P2-201ENST00000340589 1813 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
TNFSF4P23510 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
TNFSF4P23510 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFSF4P23510 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TNFSF4P23510 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
TNFSF4P23510 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TNFSF4P23510 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TNFSF4P23510 RN7SKP28-201ENST00000364770 305 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 SNORA72.3-201ENST00000365074 132 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 RNU6-468P-201ENST00000384003 109 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TNFSF4P23510 AP002784.2-201ENST00000397300 549 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFSF4P23510 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.02□□□□□ -1.45
TNFSF4P23510 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TNFSF4P23510 SNORA79B-201ENST00000410557 148 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 RNA5SP280-201ENST00000411230 115 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.02□□□□□ -1.45
TNFSF4P23510 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TNFSF4P23510 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TNFSF4P23510 AL157698.1-201ENST00000415190 1011 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 RPL17P17-201ENST00000419491 557 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.02□□□□□ -1.45
TNFSF4P23510 SNRPEP5-201ENST00000425442 278 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 OR52S1P-201ENST00000427016 937 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.02□□□□□ -1.45
TNFSF4P23510 AC009518.3-201ENST00000438972 253 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 DBIL5P2-201ENST00000443827 253 ntBASIC6.02□□□□□ -1.45
TNFSF4P23510 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms