Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC097721.1-201ENST00000427150 1253 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC092106.2-201ENST00000436597 487 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC092601.1-201ENST00000444526 383 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 TVP23CP1-201ENST00000450317 639 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.66□□□□□ -1.66
NACAE9PAV3 RN7SL654P-201ENST00000479178 292 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.66□□□□□ -1.66
NACAE9PAV3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC027667.1-201ENST00000545814 304 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC025283.1-201ENST00000572039 734 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NACAE9PAV3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC004805.3-201ENST00000603178 310 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 AL590032.1-201ENST00000604920 252 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 AC009779.8-202ENST00000607990 932 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 uc_338.29-201ENST00000615099 168 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 TCL6_3.1-201ENST00000619064 137 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 MIR1910-201ENST00000636955 80 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC006511.3-201ENST00000624929 1783 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.66□□□□□ -1.66
NACAE9PAV3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 RPL11P4-201ENST00000332269 436 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 RNA5SP333-201ENST00000363466 118 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 RNA5SP232-201ENST00000364144 119 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 RNA5SP334-201ENST00000364825 118 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 RNU1-46P-201ENST00000384425 164 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 RNA5SP474-201ENST00000391234 90 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 AL035696.2-201ENST00000407941 709 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 RNU6-233P-201ENST00000410845 141 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AL929472.1-201ENST00000417484 429 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.66□□□□□ -1.66
NACAE9PAV3 GTF3AP6-201ENST00000432585 986 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 MARK2P8-201ENST00000476069 952 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC4.66□□□□□ -1.66
NACAE9PAV3 AL591167.1-201ENST00000607321 456 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 AL445647.2-201ENST00000615170 130 ntBASIC4.66□□□□□ -1.66
NACAE9PAV3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NACAE9PAV3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC4.66□□□□□ -1.66
NACAE9PAV3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NACAE9PAV3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NACAE9PAV3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NACAE9PAV3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NACAE9PAV3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC4.65□□□□□ -1.66
NACAE9PAV3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.65□□□□□ -1.66
NACAE9PAV3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
NACAE9PAV3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
NACAE9PAV3 AL359955.1-201ENST00000455242 3275 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NACAE9PAV3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NACAE9PAV3 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NACAE9PAV3 RNA5SP176-201ENST00000390956 110 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 AL136100.1-201ENST00000407696 330 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 RN7SKP129-201ENST00000410288 299 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 RNU4-64P-201ENST00000410795 131 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.65□□□□□ -1.66
NACAE9PAV3 OR6R1P-201ENST00000431838 940 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 TIMM8BP2-201ENST00000445940 251 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 UBE2V2P4-201ENST00000447495 259 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NACAE9PAV3 RBMY2HP-201ENST00000457961 720 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 RN7SL369P-201ENST00000477138 299 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.65□□□□□ -1.66
NACAE9PAV3 GUSBP9-201ENST00000510138 584 ntBASIC4.65□□□□□ -1.66
NACAE9PAV3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms