Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC026956.1-201ENST00000558741 396 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 MIR3189-201ENST00000578735 73 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC023389.2-201ENST00000580031 955 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC090616.1-201ENST00000583895 447 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AL353807.4-201ENST00000604995 257 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AL137000.1-201ENST00000610528 1244 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 RAB28P4-201ENST00000622233 665 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 LINC02019-201ENST00000608605 2060 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 AC010132.4-201ENST00000569883 1368 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPS3Q9UNS2 GUCY1B2-204ENST00000531898 1979 ntBASIC5.66□□□□□ -1.5
COPS3Q9UNS2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 RN7SKP191-201ENST00000364713 306 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AL391419.1-201ENST00000398901 1275 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 HMGA1P8-201ENST00000414130 321 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AL592114.2-201ENST00000440142 532 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC096661.1-201ENST00000515870 822 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 SNORA70.11-201ENST00000515987 138 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 SNORA70.13-201ENST00000516116 138 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC007494.1-201ENST00000562293 760 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC019257.2-201ENST00000605539 497 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AL121985.3-201ENST00000620690 523 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 AL162377.2-201ENST00000624532 337 ntBASIC5.65□□□□□ -1.5
COPS3Q9UNS2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.65□□□□□ -1.5
COPS3Q9UNS2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COPS3Q9UNS2 AC079753.1-201ENST00000623243 3868 ntBASIC5.65□□□□□ -1.51
COPS3Q9UNS2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
COPS3Q9UNS2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COPS3Q9UNS2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COPS3Q9UNS2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.65□□□□□ -1.51
COPS3Q9UNS2 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COPS3Q9UNS2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
COPS3Q9UNS2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
COPS3Q9UNS2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COPS3Q9UNS2 AC099654.3-201ENST00000447087 1546 ntBASIC5.64□□□□□ -1.51
COPS3Q9UNS2 AP000473.2-201ENST00000602659 1537 ntBASIC5.64□□□□□ -1.51
COPS3Q9UNS2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
COPS3Q9UNS2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COPS3Q9UNS2 OR7A2P-201ENST00000304105 930 ntBASIC5.64□□□□□ -1.51
COPS3Q9UNS2 RNA5SP302-201ENST00000364896 100 ntBASIC5.64□□□□□ -1.51
COPS3Q9UNS2 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COPS3Q9UNS2 RNA5SP35-201ENST00000391257 129 ntBASIC5.64□□□□□ -1.51
COPS3Q9UNS2 RN7SKP117-201ENST00000410175 264 ntBASIC5.64□□□□□ -1.51
COPS3Q9UNS2 AC007562.1-201ENST00000421819 517 ntBASIC5.64□□□□□ -1.51
COPS3Q9UNS2 AL596268.1-201ENST00000427910 1048 ntBASIC5.64□□□□□ -1.51
COPS3Q9UNS2 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.64□□□□□ -1.51
COPS3Q9UNS2 RPSAP41-201ENST00000439695 860 ntBASIC5.64□□□□□ -1.51
COPS3Q9UNS2 OR13K1P-201ENST00000444577 975 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms