Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AP002345.1-201ENST00000456493 928 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 RPS17P11-201ENST00000474297 293 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC020779.1-201ENST00000478757 796 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC016559.1-201ENST00000511420 199 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC068631.3-201ENST00000538831 225 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC027667.1-201ENST00000545814 304 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC006116.6-201ENST00000593258 1103 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AL109653.1-201ENST00000603091 248 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC068802.1-201ENST00000603420 732 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC107952.2-201ENST00000606048 486 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC093673.2-201ENST00000609674 331 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AL121809.2-201ENST00000613169 341 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AC099786.3-201ENST00000565735 1410 ntBASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
FOXP3Q9BZS1 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AL358913.2-201ENST00000553881 1548 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 SNORA73B-201ENST00000363217 204 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 RNU6-1017P-201ENST00000363613 106 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 Y_RNA.169-201ENST00000363745 96 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 RNA5SP396-201ENST00000364834 120 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AL138880.1-201ENST00000405824 642 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 UBE2V1P9-201ENST00000414760 368 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 RPL5P27-201ENST00000437011 881 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 MTND1P27-201ENST00000451117 902 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 RPS4XP19-201ENST00000460237 736 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AL135933.1-201ENST00000498657 802 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC016144.1-201ENST00000548175 1087 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 MIR5095-201ENST00000578844 88 ntBASIC7.32□□□□□ -1.24
FOXP3Q9BZS1 AP005136.1-201ENST00000579765 429 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms