Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 NDUFA5P4-201ENST00000436704 385 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 TRAPPC2P8-201ENST00000440676 396 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 RPL21P42-201ENST00000488408 464 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 OR5H4P-201ENST00000510851 923 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 SETP21-201ENST00000514799 892 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 NPM1P6-201ENST00000521088 871 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 MIR3915-201ENST00000578518 97 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC022432.1-201ENST00000595739 310 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC013553.2-201ENST00000604244 589 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC090186.1-201ENST00000605991 572 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AL354760.1-201ENST00000608357 643 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC006335.3-201ENST00000613408 292 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC007792.1-201ENST00000623023 402 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC135068.11-201ENST00000636378 921 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC016930.1-201ENST00000468766 2205 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 BX005019.1-201ENST00000561881 1810 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC125232.1-201ENST00000452554 1408 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 HYDIN2-203ENST00000614586 13885 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 SOCS5P5-201ENST00000402732 1586 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC022507.1-201ENST00000548349 1505 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AL512353.3-201ENST00000417517 1326 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 KYNUP3-201ENST00000574386 1341 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 RN7SKP28-201ENST00000364770 305 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 DEFB108C-201ENST00000400154 252 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 SMARCE1P1-201ENST00000417747 1186 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AL513175.2-201ENST00000422071 443 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 GAPDHP73-201ENST00000423411 1007 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC017019.1-201ENST00000426129 261 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AF274573.1-201ENST00000430535 494 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 MRPS33P4-201ENST00000434892 317 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AL136454.1-201ENST00000443181 466 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 GCNT1P5-201ENST00000449274 682 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC019080.2-201ENST00000453859 394 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 RPL7L1P7-201ENST00000509986 724 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC079140.3-201ENST00000511111 550 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 OR7E87P-201ENST00000532397 929 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 OR6C7P-201ENST00000547875 934 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 EIF5A2P1-201ENST00000564027 460 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC090616.2-202ENST00000584248 222 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC012640.3-201ENST00000607847 430 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms