Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
TPM4P67936 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
TPM4P67936 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 RN7SKP281-201ENST00000410472 352 ntBASIC6.97□□□□□ -1.29
TPM4P67936 RN7SKP91-201ENST00000410852 288 ntBASIC6.97□□□□□ -1.29
TPM4P67936 RN7SKP17-201ENST00000411242 351 ntBASIC6.97□□□□□ -1.29
TPM4P67936 MED28P4-201ENST00000433137 572 ntBASIC6.97□□□□□ -1.29
TPM4P67936 RPL3P11-201ENST00000434028 1146 ntBASIC6.97□□□□□ -1.29
TPM4P67936 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.97□□□□□ -1.29
TPM4P67936 RPL6P24-201ENST00000445338 864 ntBASIC6.97□□□□□ -1.29
TPM4P67936 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
TPM4P67936 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM4P67936 AL359091.1-201ENST00000449048 1734 ntBASIC6.97□□□□□ -1.29
TPM4P67936 RANP2-201ENST00000456833 229 ntBASIC6.97□□□□□ -1.29
TPM4P67936 UOX-201ENST00000471089 899 ntBASIC6.97□□□□□ -1.29
TPM4P67936 RPL7AP30-201ENST00000482859 796 ntBASIC6.97□□□□□ -1.29
TPM4P67936 AF305872.1-201ENST00000485217 471 ntBASIC6.97□□□□□ -1.29
TPM4P67936 RPL7L1P7-201ENST00000509986 724 ntBASIC6.97□□□□□ -1.29
TPM4P67936 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.97□□□□□ -1.29
TPM4P67936 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM4P67936 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.97□□□□□ -1.29
TPM4P67936 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM4P67936 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.97□□□□□ -1.29
TPM4P67936 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM4P67936 AC092718.4-201ENST00000566639 716 ntBASIC6.97□□□□□ -1.29
TPM4P67936 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM4P67936 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 MIR4312-201ENST00000579909 76 ntBASIC6.97□□□□□ -1.29
TPM4P67936 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM4P67936 AC016590.3-201ENST00000611171 753 ntBASIC6.97□□□□□ -1.29
TPM4P67936 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM4P67936 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM4P67936 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM4P67936 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM4P67936 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
TPM4P67936 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
TPM4P67936 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
TPM4P67936 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.96□□□□□ -1.29
TPM4P67936 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
TPM4P67936 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM4P67936 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM4P67936 RNA5SP382-201ENST00000363355 112 ntBASIC6.96□□□□□ -1.3
TPM4P67936 U3.52-201ENST00000384034 216 ntBASIC6.96□□□□□ -1.3
TPM4P67936 MIR1231-201ENST00000408101 92 ntBASIC6.96□□□□□ -1.3
TPM4P67936 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM4P67936 PCMTD1P3-201ENST00000451824 472 ntBASIC6.96□□□□□ -1.3
TPM4P67936 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM4P67936 RN7SL714P-201ENST00000487050 298 ntBASIC6.96□□□□□ -1.3
TPM4P67936 AC008945.1-201ENST00000505144 499 ntBASIC6.96□□□□□ -1.3
TPM4P67936 ENPP7P3-201ENST00000509123 241 ntBASIC6.96□□□□□ -1.3
TPM4P67936 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TPM4P67936 RN7SKP196-201ENST00000516267 345 ntBASIC6.96□□□□□ -1.3
TPM4P67936 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.96□□□□□ -1.3
TPM4P67936 AP000619.2-201ENST00000546014 969 ntBASIC6.96□□□□□ -1.3
TPM4P67936 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.96□□□□□ -1.3
TPM4P67936 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM4P67936 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.96□□□□□ -1.3
TPM4P67936 MIR3187-201ENST00000583431 70 ntBASIC6.96□□□□□ -1.3
TPM4P67936 MIR132-201ENST00000591554 101 ntBASIC6.96□□□□□ -1.3
TPM4P67936 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.96□□□□□ -1.3
TPM4P67936 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM4P67936 AC027559.1-201ENST00000636288 271 ntBASIC6.96□□□□□ -1.3
TPM4P67936 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.96□□□□□ -1.3
TPM4P67936 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM4P67936 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.96□□□□□ -1.3
TPM4P67936 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM4P67936 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM4P67936 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM4P67936 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TPM4P67936 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM4P67936 AL353743.3-201ENST00000442109 1468 ntBASIC6.96□□□□□ -1.3
TPM4P67936 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM4P67936 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM4P67936 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
TPM4P67936 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM4P67936 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TPM4P67936 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM4P67936 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
TPM4P67936 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TPM4P67936 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
TPM4P67936 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
TPM4P67936 AL355834.1-201ENST00000556602 3965 ntBASIC6.95□□□□□ -1.3
TPM4P67936 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
TPM4P67936 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM4P67936 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
TPM4P67936 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM4P67936 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM4P67936 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM4P67936 AC092651.1-201ENST00000426110 312 ntBASIC6.95□□□□□ -1.3
TPM4P67936 AL590399.2-201ENST00000427536 309 ntBASIC6.95□□□□□ -1.3
TPM4P67936 IGLV3-4-201ENST00000432300 244 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms