Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.18□□□□□ -1.42
CLRN1P58418 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CLRN1P58418 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 AC092032.1-201ENST00000603090 165 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 AC092960.1-201ENST00000604762 351 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.18□□□□□ -1.42
CLRN1P58418 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 AC093673.2-201ENST00000609674 331 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 MIR6731-201ENST00000614863 72 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 AC231759.1-201ENST00000616455 597 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 MIR6829-201ENST00000620375 67 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 AC004232.3-201ENST00000622977 525 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 AC068137.4-201ENST00000638485 296 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
CLRN1P58418 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CLRN1P58418 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.18□□□□□ -1.42
CLRN1P58418 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 TUBBP10-201ENST00000427668 1301 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CLRN1P58418 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 AL359263.1-201ENST00000441188 2796 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 AC127070.3-201ENST00000503695 3263 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.17□□□□□ -1.42
CLRN1P58418 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.17□□□□□ -1.42
CLRN1P58418 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.17□□□□□ -1.42
CLRN1P58418 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC092821.2-201ENST00000545710 2042 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 RN7SKP47-201ENST00000365347 328 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.17□□□□□ -1.42
CLRN1P58418 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
CLRN1P58418 MIR640-201ENST00000385086 96 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 RNU6-796P-201ENST00000391086 107 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 RPL5P19-201ENST00000404228 893 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.17□□□□□ -1.42
CLRN1P58418 RNA5SP280-201ENST00000411230 115 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.17□□□□□ -1.42
CLRN1P58418 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 GAPDHP69-201ENST00000425504 1008 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 BX119321.1-201ENST00000428912 797 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.17□□□□□ -1.42
CLRN1P58418 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.17□□□□□ -1.42
CLRN1P58418 RPL14P5-201ENST00000436474 730 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 OSTCP2-201ENST00000437956 444 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 ARF4P4-201ENST00000439608 520 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC063955.1-201ENST00000462872 685 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 RPSAP37-201ENST00000470913 821 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 RN7SL259P-201ENST00000478499 253 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 AC106760.2-201ENST00000504159 619 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 SUMO2P7-201ENST00000511179 285 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.17□□□□□ -1.42
CLRN1P58418 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLRN1P58418 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 SETP17-201ENST00000534163 817 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 NXPE2P1-201ENST00000543705 726 ntBASIC6.17□□□□□ -1.42
CLRN1P58418 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.17□□□□□ -1.42
CLRN1P58418 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CLRN1P58418 SIGLEC31P-201ENST00000594237 551 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms