Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH13P55290 AL157884.1-201ENST00000424561 454 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AC092646.1-201ENST00000427142 901 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH13P55290 VN1R53P-201ENST00000429536 957 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH13P55290 AL020997.1-201ENST00000446554 349 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH13P55290 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.2□□□□□ -1.42
CDH13P55290 MARK2P8-201ENST00000476069 952 ntBASIC6.2□□□□□ -1.42
CDH13P55290 OR9A1P-202ENST00000484361 945 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH13P55290 RN7SL350P-201ENST00000492591 299 ntBASIC6.2□□□□□ -1.42
CDH13P55290 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH13P55290 AC073648.3-201ENST00000504939 925 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AC113398.2-201ENST00000507630 558 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH13P55290 COX6B1P4-201ENST00000519826 484 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AC025857.1-201ENST00000525252 377 ntBASIC6.2□□□□□ -1.42
CDH13P55290 OR4A40P-201ENST00000533878 948 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH13P55290 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH13P55290 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH13P55290 AC009120.3-201ENST00000563335 499 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AC133552.4-201ENST00000576103 676 ntBASIC6.2□□□□□ -1.42
CDH13P55290 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH13P55290 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH13P55290 OR7E19P-202ENST00000589942 844 ntBASIC6.2□□□□□ -1.42
CDH13P55290 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH13P55290 AC004805.3-201ENST00000603178 310 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AC073046.2-201ENST00000604756 527 ntBASIC6.2□□□□□ -1.42
CDH13P55290 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH13P55290 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AL352984.2-202ENST00000613699 155 ntBASIC6.2□□□□□ -1.42
CDH13P55290 AL138960.1-201ENST00000613838 513 ntBASIC6.2□□□□□ -1.42
CDH13P55290 LINC02495-203ENST00000636704 242 ntBASIC6.2□□□□□ -1.42
CDH13P55290 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH13P55290 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CDH13P55290 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH13P55290 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH13P55290 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH13P55290 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH13P55290 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
CDH13P55290 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH13P55290 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH13P55290 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH13P55290 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH13P55290 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH13P55290 FANCD2P2-201ENST00000437591 1400 ntBASIC6.19□□□□□ -1.42
CDH13P55290 AC027279.1-201ENST00000568885 4284 ntBASIC6.19□□□□□ -1.42
CDH13P55290 AC005702.3-201ENST00000585345 1447 ntBASIC6.19□□□□□ -1.42
CDH13P55290 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH13P55290 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH13P55290 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDH13P55290 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDH13P55290 SNORA7A-201ENST00000384765 139 ntBASIC6.19□□□□□ -1.42
CDH13P55290 AC019178.1-201ENST00000392337 440 ntBASIC6.19□□□□□ -1.42
CDH13P55290 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.19□□□□□ -1.42
CDH13P55290 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH13P55290 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH13P55290 AC013268.2-201ENST00000420753 337 ntBASIC6.19□□□□□ -1.42
CDH13P55290 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH13P55290 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH13P55290 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH13P55290 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH13P55290 FCF1P7-201ENST00000451185 558 ntBASIC6.19□□□□□ -1.42
CDH13P55290 AL022319.1-201ENST00000458183 1167 ntBASIC6.19□□□□□ -1.42
CDH13P55290 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
CDH13P55290 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH13P55290 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDH13P55290 AC093870.1-201ENST00000506837 213 ntBASIC6.19□□□□□ -1.42
CDH13P55290 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH13P55290 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH13P55290 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH13P55290 TPRX1P1-201ENST00000557620 319 ntBASIC6.19□□□□□ -1.42
CDH13P55290 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH13P55290 OR4C49P-201ENST00000563891 900 ntBASIC6.19□□□□□ -1.42
CDH13P55290 RN7SL32P-201ENST00000580514 281 ntBASIC6.19□□□□□ -1.42
CDH13P55290 RN7SL475P-201ENST00000583379 298 ntBASIC6.19□□□□□ -1.42
CDH13P55290 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.19□□□□□ -1.42
CDH13P55290 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.19□□□□□ -1.42
CDH13P55290 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.19□□□□□ -1.42
CDH13P55290 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH13P55290 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH13P55290 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH13P55290 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH13P55290 AC021422.1-201ENST00000621212 473 ntBASIC6.19□□□□□ -1.42
CDH13P55290 AC243960.7-201ENST00000623532 707 ntBASIC6.19□□□□□ -1.42
CDH13P55290 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
CDH13P55290 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
CDH13P55290 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH13P55290 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CDH13P55290 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH13P55290 KYNUP2-201ENST00000582280 1329 ntBASIC6.19□□□□□ -1.42
CDH13P55290 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH13P55290 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH13P55290 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH13P55290 MTCO1P22-201ENST00000604619 1360 ntBASIC6.18□□□□□ -1.42
CDH13P55290 RPL31P11-201ENST00000426558 1558 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms