Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC007494.1-201ENST00000562293 760 ntBASIC6.98□□□□□ -1.29
COPB1P53618 MIR378H-201ENST00000579966 83 ntBASIC6.98□□□□□ -1.29
COPB1P53618 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 AL021368.3-201ENST00000607119 578 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AC144521.1-201ENST00000607148 956 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AC092574.1-201ENST00000609771 420 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AP000240.1-201ENST00000609910 452 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.98□□□□□ -1.29
COPB1P53618 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
COPB1P53618 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.98□□□□□ -1.29
COPB1P53618 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
COPB1P53618 AL353743.3-201ENST00000442109 1468 ntBASIC6.98□□□□□ -1.29
COPB1P53618 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.98□□□□□ -1.29
COPB1P53618 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COPB1P53618 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.97□□□□□ -1.29
COPB1P53618 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
COPB1P53618 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.97□□□□□ -1.29
COPB1P53618 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
COPB1P53618 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
COPB1P53618 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.97□□□□□ -1.29
COPB1P53618 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
COPB1P53618 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.97□□□□□ -1.29
COPB1P53618 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
COPB1P53618 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.97□□□□□ -1.29
COPB1P53618 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.97□□□□□ -1.29
COPB1P53618 RN7SKP281-201ENST00000410472 352 ntBASIC6.97□□□□□ -1.29
COPB1P53618 MTATP6P11-201ENST00000428071 670 ntBASIC6.97□□□□□ -1.29
COPB1P53618 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.97□□□□□ -1.29
COPB1P53618 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.97□□□□□ -1.29
COPB1P53618 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.97□□□□□ -1.29
COPB1P53618 AC007386.1-201ENST00000455212 582 ntBASIC6.97□□□□□ -1.29
COPB1P53618 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.97□□□□□ -1.29
COPB1P53618 RPS4XP17-201ENST00000479057 754 ntBASIC6.97□□□□□ -1.29
COPB1P53618 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.97□□□□□ -1.29
COPB1P53618 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.97□□□□□ -1.29
COPB1P53618 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.97□□□□□ -1.29
COPB1P53618 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.97□□□□□ -1.29
COPB1P53618 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.97□□□□□ -1.29
COPB1P53618 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.97□□□□□ -1.29
COPB1P53618 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.97□□□□□ -1.29
COPB1P53618 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.97□□□□□ -1.29
COPB1P53618 AC092718.4-201ENST00000566639 716 ntBASIC6.97□□□□□ -1.29
COPB1P53618 AC010287.1-201ENST00000566916 357 ntBASIC6.97□□□□□ -1.29
COPB1P53618 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.97□□□□□ -1.29
COPB1P53618 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.97□□□□□ -1.29
COPB1P53618 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.97□□□□□ -1.29
COPB1P53618 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.97□□□□□ -1.29
COPB1P53618 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.97□□□□□ -1.29
COPB1P53618 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 AC005899.6-201ENST00000620729 297 ntBASIC6.97□□□□□ -1.29
COPB1P53618 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.97□□□□□ -1.29
COPB1P53618 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 IMMTP1-201ENST00000435590 2219 ntBASIC6.97□□□□□ -1.29
COPB1P53618 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.97□□□□□ -1.29
COPB1P53618 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.97□□□□□ -1.29
COPB1P53618 AP000641.1-201ENST00000531988 1639 ntBASIC6.97□□□□□ -1.29
COPB1P53618 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.97□□□□□ -1.29
COPB1P53618 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COPB1P53618 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
COPB1P53618 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.96□□□□□ -1.29
COPB1P53618 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COPB1P53618 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
COPB1P53618 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COPB1P53618 MIR551B-201ENST00000384984 96 ntBASIC6.96□□□□□ -1.3
COPB1P53618 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COPB1P53618 RNU11-6P-201ENST00000391127 133 ntBASIC6.96□□□□□ -1.3
COPB1P53618 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COPB1P53618 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COPB1P53618 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.96□□□□□ -1.3
COPB1P53618 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.96□□□□□ -1.3
COPB1P53618 AL157884.1-201ENST00000424561 454 ntBASIC6.96□□□□□ -1.3
COPB1P53618 AC079922.1-201ENST00000443291 359 ntBASIC6.96□□□□□ -1.3
COPB1P53618 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COPB1P53618 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.96□□□□□ -1.3
COPB1P53618 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.96□□□□□ -1.3
COPB1P53618 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.96□□□□□ -1.3
COPB1P53618 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.96□□□□□ -1.3
COPB1P53618 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.96□□□□□ -1.3
COPB1P53618 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.96□□□□□ -1.3
COPB1P53618 ARGFXP2-201ENST00000579304 949 ntBASIC6.96□□□□□ -1.3
COPB1P53618 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.96□□□□□ -1.3
COPB1P53618 AC004805.3-201ENST00000603178 310 ntBASIC6.96□□□□□ -1.3
COPB1P53618 AC114477.1-201ENST00000605097 605 ntBASIC6.96□□□□□ -1.3
COPB1P53618 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms