Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSR1P43307 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSR1P43307 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.85□□□□□ -1.31
SSR1P43307 AC004023.1-201ENST00000561473 1744 ntBASIC6.85□□□□□ -1.31
SSR1P43307 PSMC1P6-201ENST00000477233 1319 ntBASIC6.85□□□□□ -1.31
SSR1P43307 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.85□□□□□ -1.31
SSR1P43307 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSR1P43307 RNA5SP382-201ENST00000363355 112 ntBASIC6.85□□□□□ -1.31
SSR1P43307 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.85□□□□□ -1.31
SSR1P43307 MIR138-2-201ENST00000384916 84 ntBASIC6.85□□□□□ -1.31
SSR1P43307 MIR27A-201ENST00000385073 78 ntBASIC6.85□□□□□ -1.31
SSR1P43307 AL050335.1-201ENST00000396909 869 ntBASIC6.85□□□□□ -1.31
SSR1P43307 MRPL32P1-201ENST00000406301 247 ntBASIC6.85□□□□□ -1.31
SSR1P43307 AL590635.1-201ENST00000406314 586 ntBASIC6.85□□□□□ -1.31
SSR1P43307 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSR1P43307 RN7SKP91-201ENST00000410852 288 ntBASIC6.85□□□□□ -1.31
SSR1P43307 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.85□□□□□ -1.31
SSR1P43307 RANP6-201ENST00000413691 644 ntBASIC6.85□□□□□ -1.31
SSR1P43307 RPL6P21-201ENST00000418672 846 ntBASIC6.85□□□□□ -1.31
SSR1P43307 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.85□□□□□ -1.31
SSR1P43307 AC021876.1-201ENST00000425959 359 ntBASIC6.85□□□□□ -1.31
SSR1P43307 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.85□□□□□ -1.31
SSR1P43307 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.85□□□□□ -1.31
SSR1P43307 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.85□□□□□ -1.31
SSR1P43307 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.85□□□□□ -1.31
SSR1P43307 TREML3P-201ENST00000457327 501 ntBASIC6.85□□□□□ -1.31
SSR1P43307 CCNJP2-201ENST00000457810 1163 ntBASIC6.85□□□□□ -1.31
SSR1P43307 RN7SL70P-201ENST00000478322 302 ntBASIC6.85□□□□□ -1.31
SSR1P43307 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSR1P43307 AC092824.1-201ENST00000483524 576 ntBASIC6.85□□□□□ -1.31
SSR1P43307 SCARNA11.1-201ENST00000516918 132 ntBASIC6.85□□□□□ -1.31
SSR1P43307 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.85□□□□□ -1.31
SSR1P43307 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.85□□□□□ -1.31
SSR1P43307 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.85□□□□□ -1.31
SSR1P43307 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.85□□□□□ -1.31
SSR1P43307 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.85□□□□□ -1.31
SSR1P43307 AP002004.1-206ENST00000532441 876 ntBASIC6.85□□□□□ -1.31
SSR1P43307 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSR1P43307 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.85□□□□□ -1.31
SSR1P43307 NPM1P5-201ENST00000557228 838 ntBASIC6.85□□□□□ -1.31
SSR1P43307 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.85□□□□□ -1.31
SSR1P43307 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.85□□□□□ -1.31
SSR1P43307 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.85□□□□□ -1.31
SSR1P43307 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.85□□□□□ -1.31
SSR1P43307 AL512413.1-201ENST00000606489 382 ntBASIC6.85□□□□□ -1.31
SSR1P43307 AC005514.1-201ENST00000623521 208 ntBASIC6.85□□□□□ -1.31
SSR1P43307 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSR1P43307 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSR1P43307 AL731556.1-201ENST00000394628 3711 ntBASIC6.85□□□□□ -1.31
SSR1P43307 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.85□□□□□ -1.31
SSR1P43307 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.85□□□□□ -1.31
SSR1P43307 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSR1P43307 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.85□□□□□ -1.31
SSR1P43307 AC007342.5-201ENST00000571340 2142 ntBASIC6.85□□□□□ -1.31
SSR1P43307 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.84□□□□□ -1.31
SSR1P43307 AC010624.4-201ENST00000597606 1351 ntBASIC6.84□□□□□ -1.31
SSR1P43307 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSR1P43307 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.84□□□□□ -1.31
SSR1P43307 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.84□□□□□ -1.31
SSR1P43307 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSR1P43307 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SSR1P43307 GNG5P5-201ENST00000420444 220 ntBASIC6.84□□□□□ -1.31
SSR1P43307 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSR1P43307 SPATA20P1-201ENST00000423089 438 ntBASIC6.84□□□□□ -1.31
SSR1P43307 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.84□□□□□ -1.31
SSR1P43307 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.84□□□□□ -1.31
SSR1P43307 GAPDHP33-201ENST00000443168 1013 ntBASIC6.84□□□□□ -1.31
SSR1P43307 AC009244.1-201ENST00000450566 258 ntBASIC6.84□□□□□ -1.31
SSR1P43307 RPL23AP64-201ENST00000469465 435 ntBASIC6.84□□□□□ -1.31
SSR1P43307 RPL19P11-201ENST00000495944 589 ntBASIC6.84□□□□□ -1.31
SSR1P43307 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SSR1P43307 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.84□□□□□ -1.31
SSR1P43307 RNA5SP75-201ENST00000516841 111 ntBASIC6.84□□□□□ -1.31
SSR1P43307 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.84□□□□□ -1.31
SSR1P43307 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.84□□□□□ -1.31
SSR1P43307 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSR1P43307 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.84□□□□□ -1.31
SSR1P43307 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SSR1P43307 OR7E19P-202ENST00000589942 844 ntBASIC6.84□□□□□ -1.31
SSR1P43307 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.84□□□□□ -1.31
SSR1P43307 OR51C1P-201ENST00000608504 942 ntBASIC6.84□□□□□ -1.31
SSR1P43307 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.84□□□□□ -1.31
SSR1P43307 AC093635.1-201ENST00000609028 555 ntBASIC6.84□□□□□ -1.31
SSR1P43307 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SSR1P43307 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.84□□□□□ -1.31
SSR1P43307 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSR1P43307 AC009220.2-201ENST00000489759 1751 ntBASIC6.84□□□□□ -1.31
SSR1P43307 AC062029.1-202ENST00000606164 3651 ntBASIC6.84□□□□□ -1.31
SSR1P43307 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSR1P43307 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSR1P43307 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSR1P43307 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSR1P43307 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SSR1P43307 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.32
SSR1P43307 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
SSR1P43307 AL359976.1-201ENST00000418655 3528 ntBASIC6.83□□□□□ -1.32
SSR1P43307 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.83□□□□□ -1.32
SSR1P43307 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSR1P43307 RN7SKP191-201ENST00000364713 306 ntBASIC6.83□□□□□ -1.32
SSR1P43307 RN7SKP205-201ENST00000410999 307 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms