Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL11A1P12107 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.98□□□□□ -1.29
COL11A1P12107 BMS1P13-201ENST00000417301 885 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.98□□□□□ -1.29
COL11A1P12107 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.98□□□□□ -1.29
COL11A1P12107 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.98□□□□□ -1.29
COL11A1P12107 FTLP8-201ENST00000446770 267 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 AL157777.1-201ENST00000468100 304 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 PPIAP19-201ENST00000486414 492 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 SUMO2P7-201ENST00000511179 285 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 RN7SKP288-201ENST00000516227 268 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 AC027308.1-201ENST00000517993 110 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.98□□□□□ -1.29
COL11A1P12107 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.98□□□□□ -1.29
COL11A1P12107 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.98□□□□□ -1.29
COL11A1P12107 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.98□□□□□ -1.29
COL11A1P12107 AC013244.1-201ENST00000604279 193 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.98□□□□□ -1.29
COL11A1P12107 AC022467.1-201ENST00000614738 749 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.98□□□□□ -1.29
COL11A1P12107 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
COL11A1P12107 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
COL11A1P12107 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 FBXL21-201ENST00000297158 1305 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 AC127024.8-201ENST00000623719 2094 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.98□□□□□ -1.29
COL11A1P12107 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
COL11A1P12107 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL11A1P12107 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 SNORA64.1-201ENST00000362600 132 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 RNU105B-201ENST00000364478 208 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.97□□□□□ -1.29
COL11A1P12107 RPL36P18-201ENST00000419316 318 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.97□□□□□ -1.29
COL11A1P12107 GAPDHP48-201ENST00000436626 961 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 SDC4P-201ENST00000453285 601 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.97□□□□□ -1.29
COL11A1P12107 RN7SL273P-201ENST00000481561 299 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 RNA5SP400-201ENST00000517155 111 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.97□□□□□ -1.29
COL11A1P12107 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.97□□□□□ -1.29
COL11A1P12107 AC018659.2-201ENST00000624690 715 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 OR8G3P-202ENST00000641572 1255 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.97□□□□□ -1.29
COL11A1P12107 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.97□□□□□ -1.29
COL11A1P12107 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL11A1P12107 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
COL11A1P12107 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.97□□□□□ -1.29
COL11A1P12107 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.97□□□□□ -1.29
COL11A1P12107 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.97□□□□□ -1.29
COL11A1P12107 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.97□□□□□ -1.29
COL11A1P12107 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.97□□□□□ -1.29
COL11A1P12107 RPSAP39-201ENST00000467439 883 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.97□□□□□ -1.29
COL11A1P12107 AC022826.1-201ENST00000519383 805 ntBASIC6.97□□□□□ -1.29
COL11A1P12107 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.97□□□□□ -1.29
COL11A1P12107 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.97□□□□□ -1.29
COL11A1P12107 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
COL11A1P12107 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.97□□□□□ -1.29
COL11A1P12107 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
COL11A1P12107 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL11A1P12107 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL11A1P12107 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL11A1P12107 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL11A1P12107 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.96□□□□□ -1.29
COL11A1P12107 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.96□□□□□ -1.29
COL11A1P12107 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
COL11A1P12107 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
COL11A1P12107 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
COL11A1P12107 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
COL11A1P12107 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL11A1P12107 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.96□□□□□ -1.3
COL11A1P12107 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.96□□□□□ -1.3
COL11A1P12107 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL11A1P12107 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC6.96□□□□□ -1.3
COL11A1P12107 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL11A1P12107 RNU11-6P-201ENST00000391127 133 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms