Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM9SF3Q9HD45 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TM9SF3Q9HD45 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
TM9SF3Q9HD45 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC022613.3-201ENST00000560740 1346 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 RNA5SP333-201ENST00000363466 118 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 RNA5SP334-201ENST00000364825 118 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC092642.1-201ENST00000392417 425 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 LDHAP2-201ENST00000437325 985 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC110602.1-201ENST00000437414 318 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 GM2AP2-201ENST00000491764 562 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 HMGN1P17-201ENST00000513734 295 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AL133399.1-201ENST00000527476 298 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AP000662.1-201ENST00000530952 487 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC002519.2-203ENST00000567043 837 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AL049840.5-201ENST00000602827 552 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC124916.2-201ENST00000604416 224 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC091768.1-201ENST00000609258 930 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 AC120057.5-201ENST00000623840 154 ntBASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TM9SF3Q9HD45 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 LCOR-201ENST00000286067 4542 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AL035422.1-201ENST00000414193 397 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AL359092.1-201ENST00000417156 265 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 RPL21P50-201ENST00000417698 477 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC002127.1-201ENST00000421305 225 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 SETP9-201ENST00000423837 832 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 OSTCP4-201ENST00000424397 449 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC092865.3-201ENST00000425390 1026 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 RN7SL254P-201ENST00000460609 284 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC108103.1-201ENST00000511286 446 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 ZNF519P4-201ENST00000514008 125 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 RNA5SP418-201ENST00000515951 117 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AP004609.2-201ENST00000532177 190 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 NPIPB14P-203ENST00000532298 987 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC067852.5-201ENST00000589299 310 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AL445647.2-201ENST00000615170 130 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC241377.1-201ENST00000619797 406 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AL357140.4-201ENST00000636827 412 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AL136531.3-201ENST00000624378 3658 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms