Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AC008945.1-201ENST00000505144 499 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 CYP4F27P-201ENST00000514557 494 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 RNA5SP400-201ENST00000517155 111 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 TXNP4-201ENST00000575018 310 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 SETP3-201ENST00000581726 813 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AC027334.1-201ENST00000603257 310 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 AC016542.2-201ENST00000624201 619 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 RBPJP6-201ENST00000411556 1431 ntBASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC28BQ9BUN5 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 RNA5SP152-201ENST00000365184 110 ntBASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 AC245036.1-201ENST00000391727 309 ntBASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 OSTCP1-201ENST00000455507 450 ntBASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 AC025271.1-201ENST00000485045 429 ntBASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 RN7SL776P-201ENST00000493390 268 ntBASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 AC024451.4-201ENST00000602578 752 ntBASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 AC019257.2-201ENST00000605539 497 ntBASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 AC003992.1-201ENST00000635364 557 ntBASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC28BQ9BUN5 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC28BQ9BUN5 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CCDC28BQ9BUN5 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.15□□□□□ -1.43
CCDC28BQ9BUN5 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CCDC28BQ9BUN5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC28BQ9BUN5 AC004158.1-201ENST00000564508 4319 ntBASIC6.15□□□□□ -1.43
CCDC28BQ9BUN5 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC022325.1-201ENST00000502748 2199 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AL138847.1-201ENST00000258651 546 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AL158827.1-201ENST00000416300 391 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC000089.1-201ENST00000424559 801 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 VPS25P1-201ENST00000455691 508 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 TUBBP11-201ENST00000472255 252 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 HMGN2P47-201ENST00000559378 272 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AP006587.6-201ENST00000582128 1091 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 NPIPB1P-202ENST00000588786 828 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms