Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC42Q96M95 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC42Q96M95 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC42Q96M95 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC42Q96M95 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC42Q96M95 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.73□□□□□ -1.33
CCDC42Q96M95 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC42Q96M95 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC013268.3-201ENST00000262716 2324 ntBASIC6.72□□□□□ -1.33
CCDC42Q96M95 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AL356133.1-201ENST00000444762 372 ntBASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC073594.1-201ENST00000462065 364 ntBASIC6.72□□□□□ -1.33
CCDC42Q96M95 PPP1R11P1-201ENST00000486095 376 ntBASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC005332.4-201ENST00000592752 579 ntBASIC6.72□□□□□ -1.33
CCDC42Q96M95 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC069234.4-201ENST00000621276 412 ntBASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC42Q96M95 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC42Q96M95 AC009220.2-201ENST00000489759 1751 ntBASIC6.72□□□□□ -1.33
CCDC42Q96M95 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC42Q96M95 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC42Q96M95 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC42Q96M95 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC42Q96M95 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC42Q96M95 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC42Q96M95 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.71□□□□□ -1.33
CCDC42Q96M95 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CCDC42Q96M95 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CCDC42Q96M95 NCOA4P2-201ENST00000340589 1813 ntBASIC6.71□□□□□ -1.33
CCDC42Q96M95 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC42Q96M95 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC42Q96M95 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC42Q96M95 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC42Q96M95 AC114876.1-201ENST00000490962 1366 ntBASIC6.71□□□□□ -1.33
CCDC42Q96M95 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.71□□□□□ -1.33
CCDC42Q96M95 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
CCDC42Q96M95 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC42Q96M95 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.71□□□□□ -1.33
CCDC42Q96M95 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC42Q96M95 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC026310.1-201ENST00000396004 378 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 AL096800.1-201ENST00000405326 893 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC016908.1-201ENST00000442571 1219 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 MORF4-201ENST00000447135 971 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 RN7SL372P-201ENST00000461982 298 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC008868.1-201ENST00000509786 737 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AL133399.1-201ENST00000527476 298 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 RN7SL371P-201ENST00000578099 267 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC004890.3-201ENST00000605566 1095 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 AL138960.1-201ENST00000613838 513 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 AC021422.1-201ENST00000621212 473 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CCDC42Q96M95 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC42Q96M95 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC42Q96M95 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AL591135.1-201ENST00000401578 5914 ntBASIC6.71□□□□□ -1.34
CCDC42Q96M95 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC42Q96M95 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC42Q96M95 AL136984.1-201ENST00000607611 1893 ntBASIC6.7□□□□□ -1.34
CCDC42Q96M95 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CCDC42Q96M95 AL359091.1-201ENST00000449048 1734 ntBASIC6.7□□□□□ -1.34
CCDC42Q96M95 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms