Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 LCN1P2-201ENST00000372030 223 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AL360271.1-201ENST00000395679 510 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 BMP6P1-201ENST00000431230 679 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 H3F3BP1-201ENST00000440551 403 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 BMS1P11-201ENST00000442351 885 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AL354872.1-201ENST00000456361 967 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 TREML3P-201ENST00000457327 501 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 BMS1P9-201ENST00000457640 885 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC009567.2-201ENST00000502989 349 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC093870.1-201ENST00000506837 213 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC106800.3-201ENST00000511389 308 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC009120.3-201ENST00000563335 499 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 OR4H6P-201ENST00000563771 921 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 OR4C49P-201ENST00000563891 900 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 RN7SL657P-201ENST00000582431 293 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AL512430.4-201ENST00000603085 613 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC004805.3-201ENST00000603178 310 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC073046.2-201ENST00000604756 527 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 MIR7854-201ENST00000620068 65 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC135068.11-201ENST00000636378 921 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC005725.1-201ENST00000577346 2607 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AC005702.3-201ENST00000585345 1447 ntBASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.08□□□□□ -1.44
CLHC1Q8NHS4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AC092634.1-201ENST00000366505 199 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 MRPS6P2-201ENST00000381143 370 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AC019178.1-201ENST00000392337 440 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 OR2W4P-201ENST00000406496 926 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AL157884.1-201ENST00000424561 454 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AL020997.1-201ENST00000446554 349 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 RPL36AP55-201ENST00000454114 305 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 GOLGA5P1-201ENST00000507317 980 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 RNA5SP75-201ENST00000516841 111 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 OR4A40P-201ENST00000533878 948 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 RN7SL32P-201ENST00000580514 281 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AC012175.1-201ENST00000603755 531 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AC114477.1-201ENST00000605097 605 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 Z93930.3-201ENST00000607919 749 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AL008582.1-201ENST00000609612 442 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AC069542.2-201ENST00000624816 216 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 LINC02495-203ENST00000636704 242 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 IMMTP1-201ENST00000435590 2219 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 AOX3P-204ENST00000491025 2107 ntBASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.07□□□□□ -1.44
CLHC1Q8NHS4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms