Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 SNORA7A-201ENST00000384765 139 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 NPM1P38-201ENST00000403835 865 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 NPM1P9-201ENST00000453156 844 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 RN7SL790P-201ENST00000474043 298 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 RN7SL267P-201ENST00000485107 261 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 PPP1R11P1-201ENST00000486095 376 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 MTCO1P55-201ENST00000489829 745 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AL133399.1-201ENST00000527476 298 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 HMGN2P47-201ENST00000559378 272 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 MIR3159-201ENST00000584572 74 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AC005702.3-201ENST00000585345 1447 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AL352984.2-202ENST00000613699 155 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AL138960.1-201ENST00000613838 513 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 MIR6883-201ENST00000614952 78 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 MIR6085-201ENST00000618314 110 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AC068769.1-201ENST00000474767 2426 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 AC140479.2-201ENST00000421567 3130 ntBASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ZNF439Q8NDP4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AL731532.1-201ENST00000623972 4236 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 RN7SKP186-201ENST00000365371 303 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AP003170.5-201ENST00000397185 335 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AL139184.1-202ENST00000422303 222 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 RPL31P11-202ENST00000454082 372 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AP001804.1-201ENST00000526868 919 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC133552.4-201ENST00000576103 676 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC068408.1-201ENST00000577406 1144 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC090616.1-201ENST00000583895 447 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC024255.1-201ENST00000614376 102 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC004836.1-201ENST00000623032 634 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AP000550.3-201ENST00000637734 379 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms