Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CHRNB3Q05901 AL359976.1-201ENST00000418655 3528 ntBASIC6.01□□□□□ -1.45
CHRNB3Q05901 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHRNB3Q05901 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
CHRNB3Q05901 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.01□□□□□ -1.45
CHRNB3Q05901 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.01□□□□□ -1.45
CHRNB3Q05901 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHRNB3Q05901 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CHRNB3Q05901 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CHRNB3Q05901 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHRNB3Q05901 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6□□□□□ -1.45
CHRNB3Q05901 AC092692.1-201ENST00000623625 2595 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6□□□□□ -1.45
CHRNB3Q05901 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CHRNB3Q05901 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CHRNB3Q05901 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHRNB3Q05901 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CHRNB3Q05901 RNA5-8SP5-201ENST00000365304 152 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6□□□□□ -1.45
CHRNB3Q05901 MRPS21P5-201ENST00000417885 231 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6□□□□□ -1.45
CHRNB3Q05901 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6□□□□□ -1.45
CHRNB3Q05901 AC234771.4-201ENST00000441416 730 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6□□□□□ -1.45
CHRNB3Q05901 RPL7AP71-201ENST00000451120 739 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 AC073476.1-201ENST00000452854 407 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6□□□□□ -1.45
CHRNB3Q05901 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6□□□□□ -1.45
CHRNB3Q05901 RN7SL790P-201ENST00000474043 298 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 AC131392.1-201ENST00000506490 633 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6□□□□□ -1.45
CHRNB3Q05901 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6□□□□□ -1.45
CHRNB3Q05901 AC139713.1-202ENST00000512366 460 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6□□□□□ -1.45
CHRNB3Q05901 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6□□□□□ -1.45
CHRNB3Q05901 OR5D2P-201ENST00000524390 911 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6□□□□□ -1.45
CHRNB3Q05901 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CHRNB3Q05901 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6□□□□□ -1.45
CHRNB3Q05901 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6□□□□□ -1.45
CHRNB3Q05901 RN7SL208P-201ENST00000577964 296 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 RN7SL66P-201ENST00000582099 264 ntBASIC6□□□□□ -1.45
CHRNB3Q05901 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHRNB3Q05901 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6□□□□□ -1.45
CHRNB3Q05901 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6□□□□□ -1.45
CHRNB3Q05901 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6□□□□□ -1.45
CHRNB3Q05901 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6□□□□□ -1.45
CHRNB3Q05901 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHRNB3Q05901 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHRNB3Q05901 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHRNB3Q05901 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHRNB3Q05901 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHRNB3Q05901 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
CHRNB3Q05901 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHRNB3Q05901 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 RNA5SP176-201ENST00000390956 110 ntBASIC5.99□□□□□ -1.45
CHRNB3Q05901 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.99□□□□□ -1.45
CHRNB3Q05901 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 RPL31P11-202ENST00000454082 372 ntBASIC5.99□□□□□ -1.45
CHRNB3Q05901 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 AC099340.1-201ENST00000475247 599 ntBASIC5.99□□□□□ -1.45
CHRNB3Q05901 MRPL57P6-201ENST00000506570 309 ntBASIC5.99□□□□□ -1.45
CHRNB3Q05901 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 LDHBP3-201ENST00000514909 822 ntBASIC5.99□□□□□ -1.45
CHRNB3Q05901 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 AP001267.4-201ENST00000602598 545 ntBASIC5.99□□□□□ -1.45
CHRNB3Q05901 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 MIR6813-201ENST00000621638 56 ntBASIC5.99□□□□□ -1.45
CHRNB3Q05901 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHRNB3Q05901 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.99□□□□□ -1.45
CHRNB3Q05901 MAPK10-287ENST00000641217 3037 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms