Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RN7SKP67-201ENST00000515905 235 ntBASIC6.72□□□□□ -1.33
CHRNA3P32297 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.72□□□□□ -1.33
CHRNA3P32297 AP001000.1-201ENST00000526843 742 ntBASIC6.72□□□□□ -1.33
CHRNA3P32297 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.72□□□□□ -1.33
CHRNA3P32297 AC037479.1-201ENST00000558361 625 ntBASIC6.72□□□□□ -1.33
CHRNA3P32297 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.72□□□□□ -1.33
CHRNA3P32297 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.72□□□□□ -1.33
CHRNA3P32297 NDUFB9P1-201ENST00000604683 510 ntBASIC6.72□□□□□ -1.33
CHRNA3P32297 AC019257.2-201ENST00000605539 497 ntBASIC6.72□□□□□ -1.33
CHRNA3P32297 AC093635.1-201ENST00000609028 555 ntBASIC6.72□□□□□ -1.33
CHRNA3P32297 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA3P32297 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA3P32297 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA3P32297 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA3P32297 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CHRNA3P32297 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA3P32297 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA3P32297 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CHRNA3P32297 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.72□□□□□ -1.33
CHRNA3P32297 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHRNA3P32297 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CHRNA3P32297 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
CHRNA3P32297 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.71□□□□□ -1.33
CHRNA3P32297 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.71□□□□□ -1.33
CHRNA3P32297 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CHRNA3P32297 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CHRNA3P32297 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CHRNA3P32297 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.71□□□□□ -1.34
CHRNA3P32297 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CHRNA3P32297 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CHRNA3P32297 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.71□□□□□ -1.34
CHRNA3P32297 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CHRNA3P32297 AL645939.3-201ENST00000435408 225 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 CLNS1AP1-201ENST00000435954 682 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 AC234771.2-201ENST00000445718 597 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 AC103563.5-201ENST00000455643 364 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.71□□□□□ -1.34
CHRNA3P32297 AC114728.1-201ENST00000488289 483 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 AC093870.1-201ENST00000506837 213 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 AC093664.1-201ENST00000511779 289 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 SCARNA5-201ENST00000516201 276 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.71□□□□□ -1.34
CHRNA3P32297 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.71□□□□□ -1.34
CHRNA3P32297 IGKV1D-22-201ENST00000518953 324 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.71□□□□□ -1.34
CHRNA3P32297 AC026956.1-201ENST00000558741 396 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 OR4H6P-201ENST00000563771 921 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.71□□□□□ -1.34
CHRNA3P32297 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.71□□□□□ -1.34
CHRNA3P32297 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CHRNA3P32297 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.71□□□□□ -1.34
CHRNA3P32297 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHRNA3P32297 BIN2P1-201ENST00000504996 1530 ntBASIC6.71□□□□□ -1.34
CHRNA3P32297 IMMTP1-201ENST00000435590 2219 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CHRNA3P32297 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA3P32297 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.7□□□□□ -1.34
CHRNA3P32297 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.7□□□□□ -1.34
CHRNA3P32297 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA3P32297 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CHRNA3P32297 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CHRNA3P32297 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CHRNA3P32297 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CHRNA3P32297 RPL5P20-201ENST00000403848 896 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA3P32297 UBE2V1P14-201ENST00000415815 558 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.7□□□□□ -1.34
CHRNA3P32297 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.7□□□□□ -1.34
CHRNA3P32297 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA3P32297 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.7□□□□□ -1.34
CHRNA3P32297 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.7□□□□□ -1.34
CHRNA3P32297 RPL29P23-201ENST00000486188 442 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 AL117692.1-201ENST00000494283 713 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 AC131392.1-201ENST00000506490 633 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA3P32297 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.7□□□□□ -1.34
CHRNA3P32297 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.7□□□□□ -1.34
CHRNA3P32297 OR4A40P-201ENST00000533878 948 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.7□□□□□ -1.34
CHRNA3P32297 AC007494.1-201ENST00000562293 760 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 AC092718.4-201ENST00000566639 716 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 MRPS21P9-201ENST00000571150 257 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 AC025283.1-201ENST00000572039 734 ntBASIC6.7□□□□□ -1.34
CHRNA3P32297 RN7SL208P-201ENST00000577964 296 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms