Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Haglr-201ENSMUST00000100000 2085 ntBASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ClcnkaQ9WUB7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Gm715-201ENSMUST00000117865 831 ntBASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Gm24841-201ENSMUST00000158676 357 ntBASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClcnkaQ9WUB7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClcnkaQ9WUB7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.67■□□□□ 0.1
ClcnkaQ9WUB7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.67■□□□□ 0.1
ClcnkaQ9WUB7 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.67■□□□□ 0.1
ClcnkaQ9WUB7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClcnkaQ9WUB7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClcnkaQ9WUB7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ClcnkaQ9WUB7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClcnkaQ9WUB7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClcnkaQ9WUB7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClcnkaQ9WUB7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Gm12085-201ENSMUST00000119263 940 ntBASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClcnkaQ9WUB7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClcnkaQ9WUB7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClcnkaQ9WUB7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClcnkaQ9WUB7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClcnkaQ9WUB7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClcnkaQ9WUB7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.65■□□□□ 0.1
ClcnkaQ9WUB7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClcnkaQ9WUB7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClcnkaQ9WUB7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClcnkaQ9WUB7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClcnkaQ9WUB7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 319.1 ms