Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps29Q9QZ88 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps29Q9QZ88 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps29Q9QZ88 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Vps29Q9QZ88 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps29Q9QZ88 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Gm17661-201ENSMUST00000170317 270 ntBASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps29Q9QZ88 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps29Q9QZ88 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Gm8520-201ENSMUST00000186517 868 ntBASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Vps29Q9QZ88 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Gm12085-201ENSMUST00000119263 940 ntBASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.28■□□□□ 0.2
Vps29Q9QZ88 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps29Q9QZ88 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps29Q9QZ88 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms