Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube4bQ9ES00 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube4bQ9ES00 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ube4bQ9ES00 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ube4bQ9ES00 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Gm9988-201ENSMUST00000069786 435 ntBASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube4bQ9ES00 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4bQ9ES00 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms