Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RTRAFQ9CQE8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Mir7075-201ENSMUST00000184187 82 ntBASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RTRAFQ9CQE8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Gm22325-201ENSMUST00000158904 308 ntBASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTRAFQ9CQE8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms