Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd3Q99LE3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Gm23634-201ENSMUST00000175071 91 ntBASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Mir1668-201ENSMUST00000184114 107 ntBASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd3Q99LE3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lysmd3Q99LE3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd3Q99LE3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Gm27389-201ENSMUST00000183622 195 ntBASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Gm21559-201ENSMUST00000220638 855 ntBASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Gm8587-201ENSMUST00000076538 843 ntBASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd3Q99LE3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms