Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga9Q91XX9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhga9Q91XX9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhga9Q91XX9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Gm27463-201ENSMUST00000183569 57 ntBASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga9Q91XX9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhga9Q91XX9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pcdhga9Q91XX9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhga9Q91XX9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhga9Q91XX9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms