Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rab40cQ8VHQ4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rab40cQ8VHQ4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rab40cQ8VHQ4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rab40cQ8VHQ4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rab40cQ8VHQ4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Gm42642-201ENSMUST00000200683 355 ntBASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rab40cQ8VHQ4 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Gm2399-201ENSMUST00000104944 225 ntBASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Gm18284-201ENSMUST00000172604 624 ntBASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Zfp783-201ENSMUST00000095946 670 ntBASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rab40cQ8VHQ4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms