Protein–RNA interactions for Protein: Q80ZV0

Rnaseh2b, Ribonuclease H2 subunit B, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2bQ80ZV0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnaseh2bQ80ZV0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnaseh2bQ80ZV0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Rnaseh2bQ80ZV0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnaseh2bQ80ZV0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.85■□□□□ 0.45
Rnaseh2bQ80ZV0 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.85■□□□□ 0.45
Rnaseh2bQ80ZV0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnaseh2bQ80ZV0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rnaseh2bQ80ZV0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnaseh2bQ80ZV0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnaseh2bQ80ZV0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Rnaseh2bQ80ZV0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rnaseh2bQ80ZV0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rnaseh2bQ80ZV0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnaseh2bQ80ZV0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnaseh2bQ80ZV0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnaseh2bQ80ZV0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnaseh2bQ80ZV0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnaseh2bQ80ZV0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 Gm37292-201ENSMUST00000192062 758 ntBASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnaseh2bQ80ZV0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Gm24841-201ENSMUST00000158676 357 ntBASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnaseh2bQ80ZV0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rnaseh2bQ80ZV0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnaseh2bQ80ZV0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnaseh2bQ80ZV0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnaseh2bQ80ZV0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnaseh2bQ80ZV0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnaseh2bQ80ZV0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rnaseh2bQ80ZV0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rnaseh2bQ80ZV0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms