Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gm18666-201ENSMUST00000190039 958 ntBASIC19.1■□□□□ 0.65
Abcf1Q6P542 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Abcf1Q6P542 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Abcf1Q6P542 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcf1Q6P542 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcf1Q6P542 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcf1Q6P542 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcf1Q6P542 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Abcf1Q6P542 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Abcf1Q6P542 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.09■□□□□ 0.65
Abcf1Q6P542 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcf1Q6P542 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcf1Q6P542 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcf1Q6P542 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Abcf1Q6P542 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Abcf1Q6P542 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Abcf1Q6P542 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Abcf1Q6P542 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Abcf1Q6P542 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.08■□□□□ 0.64
Abcf1Q6P542 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Abcf1Q6P542 Gm13158-201ENSMUST00000122007 736 ntBASIC19.08■□□□□ 0.64
Abcf1Q6P542 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Abcf1Q6P542 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Abcf1Q6P542 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Abcf1Q6P542 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.08■□□□□ 0.64
Abcf1Q6P542 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Gm5643-201ENSMUST00000117081 966 ntBASIC19.07■□□□□ 0.64
Abcf1Q6P542 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Zfp783-201ENSMUST00000095946 670 ntBASIC19.07■□□□□ 0.64
Abcf1Q6P542 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.07■□□□□ 0.64
Abcf1Q6P542 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Abcf1Q6P542 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Abcf1Q6P542 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.05■□□□□ 0.64
Abcf1Q6P542 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.05■□□□□ 0.64
Abcf1Q6P542 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Gm10812-201ENSMUST00000099864 546 ntBASIC19.05■□□□□ 0.64
Abcf1Q6P542 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.05■□□□□ 0.64
Abcf1Q6P542 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Abcf1Q6P542 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.05■□□□□ 0.64
Abcf1Q6P542 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.04■□□□□ 0.64
Abcf1Q6P542 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Abcf1Q6P542 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.04■□□□□ 0.64
Abcf1Q6P542 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms