Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga7Q6DD96 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga7Q6DD96 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhga7Q6DD96 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga7Q6DD96 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga7Q6DD96 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Pcdhga7Q6DD96 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga7Q6DD96 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga7Q6DD96 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhga7Q6DD96 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga7Q6DD96 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Gm12441-201ENSMUST00000121806 588 ntBASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhga7Q6DD96 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Gm37292-201ENSMUST00000192062 758 ntBASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga7Q6DD96 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga7Q6DD96 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga7Q6DD96 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms