Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trdv2-2Q5R1A4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.1□□□□□ -0.31
Trdv2-2Q5R1A4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Gm10418-201ENSMUST00000100943 576 ntBASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trdv2-2Q5R1A4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trdv2-2Q5R1A4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-2Q5R1A4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-2Q5R1A4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms