Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Gm715-201ENSMUST00000117865 831 ntBASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Syne3Q4FZC9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Syne3Q4FZC9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Syne3Q4FZC9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Syne3Q4FZC9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Syne3Q4FZC9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Syne3Q4FZC9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Syne3Q4FZC9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.08■□□□□ 0.49
Syne3Q4FZC9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Syne3Q4FZC9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne3Q4FZC9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne3Q4FZC9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Syne3Q4FZC9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne3Q4FZC9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne3Q4FZC9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.07■□□□□ 0.48
Syne3Q4FZC9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Syne3Q4FZC9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne3Q4FZC9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms