Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shcbp1lQ3TTP0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shcbp1lQ3TTP0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Gm23634-201ENSMUST00000175071 91 ntBASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shcbp1lQ3TTP0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Gm7370-201ENSMUST00000219471 767 ntBASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shcbp1lQ3TTP0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms