Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmx3P42581 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Gm26571-201ENSMUST00000181399 666 ntBASIC14.26□□□□□ -0.13
Hmx3P42581 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmx3P42581 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Hmx3P42581 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.25□□□□□ -0.13
Hmx3P42581 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hmx3P42581 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hmx3P42581 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.25□□□□□ -0.13
Hmx3P42581 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hmx3P42581 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.25□□□□□ -0.13
Hmx3P42581 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.25□□□□□ -0.13
Hmx3P42581 Gm42569-201ENSMUST00000200539 472 ntBASIC14.25□□□□□ -0.13
Hmx3P42581 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hmx3P42581 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hmx3P42581 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Hmx3P42581 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hmx3P42581 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmx3P42581 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.24□□□□□ -0.13
Hmx3P42581 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmx3P42581 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.24□□□□□ -0.13
Hmx3P42581 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.24□□□□□ -0.13
Hmx3P42581 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmx3P42581 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.24□□□□□ -0.13
Hmx3P42581 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmx3P42581 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Hmx3P42581 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmx3P42581 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmx3P42581 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmx3P42581 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmx3P42581 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hmx3P42581 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmx3P42581 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Hmx3P42581 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmx3P42581 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmx3P42581 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmx3P42581 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms