Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN1P07384 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.47■□□□□ 0.71
CAPN1P07384 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.47■□□□□ 0.71
CAPN1P07384 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPN1P07384 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.46■□□□□ 0.71
CAPN1P07384 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN1P07384 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPN1P07384 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN1P07384 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN1P07384 AC007952.6-201ENST00000573168 2673 ntBASIC19.46■□□□□ 0.71
CAPN1P07384 AC003957.1-201ENST00000625108 2673 ntBASIC19.46■□□□□ 0.71
CAPN1P07384 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPN1P07384 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN1P07384 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CAPN1P07384 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.46■□□□□ 0.71
CAPN1P07384 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.46■□□□□ 0.71
CAPN1P07384 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPN1P07384 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN1P07384 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN1P07384 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPN1P07384 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.46■□□□□ 0.71
CAPN1P07384 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
CAPN1P07384 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN1P07384 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN1P07384 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN1P07384 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN1P07384 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CAPN1P07384 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN1P07384 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN1P07384 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN1P07384 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CAPN1P07384 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN1P07384 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN1P07384 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN1P07384 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.45■□□□□ 0.7
CAPN1P07384 ESRRAP1-201ENST00000400596 1257 ntBASIC19.45■□□□□ 0.7
CAPN1P07384 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.45■□□□□ 0.7
CAPN1P07384 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.45■□□□□ 0.7
CAPN1P07384 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN1P07384 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.45■□□□□ 0.7
CAPN1P07384 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN1P07384 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN1P07384 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.45■□□□□ 0.7
CAPN1P07384 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CAPN1P07384 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.45■□□□□ 0.7
CAPN1P07384 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN1P07384 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPN1P07384 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPN1P07384 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CAPN1P07384 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPN1P07384 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 KRT18P29-201ENST00000397031 1267 ntBASIC19.44■□□□□ 0.7
CAPN1P07384 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.44■□□□□ 0.7
CAPN1P07384 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPN1P07384 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.44■□□□□ 0.7
CAPN1P07384 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
CAPN1P07384 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPN1P07384 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CAPN1P07384 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.44■□□□□ 0.7
CAPN1P07384 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN1P07384 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.43■□□□□ 0.7
CAPN1P07384 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
CAPN1P07384 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CAPN1P07384 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CAPN1P07384 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.43■□□□□ 0.7
CAPN1P07384 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CAPN1P07384 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.43■□□□□ 0.7
CAPN1P07384 UNC93B5-201ENST00000530315 699 ntBASIC19.43■□□□□ 0.7
CAPN1P07384 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CAPN1P07384 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CAPN1P07384 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN1P07384 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN1P07384 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN1P07384 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms