Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.1■□□□□ 0.33
Phox2bO35690 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.1■□□□□ 0.33
Phox2bO35690 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.1■□□□□ 0.33
Phox2bO35690 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Phox2bO35690 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phox2bO35690 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phox2bO35690 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phox2bO35690 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Phox2bO35690 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Phox2bO35690 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.09■□□□□ 0.33
Phox2bO35690 Gm11779-201ENSMUST00000118541 368 ntBASIC17.09■□□□□ 0.33
Phox2bO35690 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC17.09■□□□□ 0.33
Phox2bO35690 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.09■□□□□ 0.33
Phox2bO35690 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.09■□□□□ 0.33
Phox2bO35690 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Phox2bO35690 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phox2bO35690 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phox2bO35690 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phox2bO35690 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phox2bO35690 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phox2bO35690 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Phox2bO35690 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phox2bO35690 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phox2bO35690 Gm15794-201ENSMUST00000120182 631 ntBASIC17.08■□□□□ 0.32
Phox2bO35690 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phox2bO35690 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.08■□□□□ 0.32
Phox2bO35690 Gm37722-201ENSMUST00000193757 208 ntBASIC17.08■□□□□ 0.32
Phox2bO35690 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Phox2bO35690 Gm5364-201ENSMUST00000216789 889 ntBASIC17.08■□□□□ 0.32
Phox2bO35690 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phox2bO35690 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phox2bO35690 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Phox2bO35690 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Phox2bO35690 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phox2bO35690 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phox2bO35690 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.07■□□□□ 0.32
Phox2bO35690 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.07■□□□□ 0.32
Phox2bO35690 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.07■□□□□ 0.32
Phox2bO35690 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Phox2bO35690 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Phox2bO35690 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Mir5131-201ENSMUST00000175426 93 ntBASIC17.07■□□□□ 0.32
Phox2bO35690 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Phox2bO35690 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phox2bO35690 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phox2bO35690 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phox2bO35690 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phox2bO35690 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.06■□□□□ 0.32
Phox2bO35690 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.06■□□□□ 0.32
Phox2bO35690 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.06■□□□□ 0.32
Phox2bO35690 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.06■□□□□ 0.32
Phox2bO35690 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phox2bO35690 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phox2bO35690 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Phox2bO35690 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phox2bO35690 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phox2bO35690 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Phox2bO35690 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Phox2bO35690 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Phox2bO35690 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.05■□□□□ 0.32
Phox2bO35690 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Phox2bO35690 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phox2bO35690 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms