Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm10812-201ENSMUST00000099864 546 ntBASIC17.51■□□□□ 0.39
Atf6F6VAN0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atf6F6VAN0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Gm37025-201ENSMUST00000195159 829 ntBASIC17.5■□□□□ 0.39
Atf6F6VAN0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atf6F6VAN0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.49■□□□□ 0.39
Atf6F6VAN0 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.49■□□□□ 0.39
Atf6F6VAN0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atf6F6VAN0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.48■□□□□ 0.39
Atf6F6VAN0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Gm715-201ENSMUST00000117865 831 ntBASIC17.48■□□□□ 0.39
Atf6F6VAN0 Gm17661-201ENSMUST00000170317 270 ntBASIC17.48■□□□□ 0.39
Atf6F6VAN0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.48■□□□□ 0.39
Atf6F6VAN0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.48■□□□□ 0.39
Atf6F6VAN0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.48■□□□□ 0.39
Atf6F6VAN0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Atf6F6VAN0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.47■□□□□ 0.39
Atf6F6VAN0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Atf6F6VAN0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atf6F6VAN0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms