Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.27■□□□□ 0.52
Sh2d4bA6X942 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sh2d4bA6X942 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Sh2d4bA6X942 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh2d4bA6X942 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Gm9013-201ENSMUST00000132939 882 ntBASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4bA6X942 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sh2d4bA6X942 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Gm21559-201ENSMUST00000220638 855 ntBASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Gm8587-201ENSMUST00000076538 843 ntBASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4bA6X942 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Gm44771-201ENSMUST00000206975 626 ntBASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Gm4974-201ENSMUST00000209974 875 ntBASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Gm18669-201ENSMUST00000216049 778 ntBASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4bA6X942 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Gm8969-201ENSMUST00000199694 526 ntBASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4bA6X942 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4bA6X942 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4bA6X942 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4bA6X942 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4bA6X942 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms