Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Spcs1-204ENSMUST00000226782 949 ntBASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm45212-201ENSMUST00000205831 3403 ntBASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm22238-201ENSMUST00000175222 88 ntBASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-27A0A0G2JF28 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Mir8112-201ENSMUST00000184382 131 ntBASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-27A0A0G2JF28 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm38205-201ENSMUST00000192243 258 ntBASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC10.73□□□□□ -0.69
Igkv8-27A0A0G2JF28 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms