Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3n-3A0A0G2JEM0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm22325-201ENSMUST00000158904 308 ntBASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trav3n-3A0A0G2JEM0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3n-3A0A0G2JEM0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms