Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm26833-201ENSMUST00000180899 440 ntBASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm8839-201ENSMUST00000121279 1645 ntBASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Smad6-203ENSMUST00000179458 273 ntBASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm45417-201ENSMUST00000209533 758 ntBASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv8-28A0A0G2JE47 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Igkv8-28A0A0G2JE47 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Igkv8-28A0A0G2JE47 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Igkv8-28A0A0G2JE47 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC10.71□□□□□ -0.7
Igkv8-28A0A0G2JE47 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Igkv8-28A0A0G2JE47 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Igkv8-28A0A0G2JE47 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm38205-201ENSMUST00000192243 258 ntBASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv8-28A0A0G2JE47 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv8-28A0A0G2JE47 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms