Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9d-3A0A075B695 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-3A0A075B695 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav9d-3A0A075B695 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-3A0A075B695 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms