Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.23□□□□□ -0.29
Trav16A0A075B653 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav16A0A075B653 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Nespas-201ENSMUST00000143738 1083 ntBASIC13.23□□□□□ -0.29
Trav16A0A075B653 Gm6420-201ENSMUST00000193885 723 ntBASIC13.23□□□□□ -0.29
Trav16A0A075B653 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.23□□□□□ -0.29
Trav16A0A075B653 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav16A0A075B653 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Mir8112-201ENSMUST00000184382 131 ntBASIC13.22□□□□□ -0.29
Trav16A0A075B653 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav16A0A075B653 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16A0A075B653 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav16A0A075B653 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav16A0A075B653 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16A0A075B653 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16A0A075B653 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16A0A075B653 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16A0A075B653 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16A0A075B653 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16A0A075B653 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.21□□□□□ -0.3
Trav16A0A075B653 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16A0A075B653 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16A0A075B653 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16A0A075B653 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16A0A075B653 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Gm10418-201ENSMUST00000100943 576 ntBASIC13.2□□□□□ -0.3
Trav16A0A075B653 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms