Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Gm10138-203ENSMUST00000206952 366 ntBASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Gm10602-201ENSMUST00000098239 609 ntBASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-4A0A075B631 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Mir6349-201ENSMUST00000184059 97 ntBASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-4A0A075B631 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Gm7292-201ENSMUST00000194706 2527 ntBASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-4A0A075B631 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms