Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX3Q99909 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 AL121949.2-201ENST00000403446 1548 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 AC102941.1-201ENST00000567616 1537 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 AC119674.1-204ENST00000641348 1343 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSX3Q99909 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSX3Q99909 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSX3Q99909 OR10D1P-201ENST00000355343 936 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 RN7SKP189-201ENST00000365042 330 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
SSX3Q99909 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 LSM3P3-201ENST00000436601 306 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 SNRPFP2-201ENST00000440710 251 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.6□□□□□ -1.51
SSX3Q99909 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 AL034399.1-201ENST00000451535 380 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX3Q99909 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 RN7SL372P-201ENST00000461982 298 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 ASNSP4-201ENST00000511103 447 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX3Q99909 MRPS5P3-201ENST00000515577 166 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 AP005902.2-201ENST00000518393 307 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 IGKV2D-38-201ENST00000518423 240 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 AC130364.2-201ENST00000528639 604 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 ACTG1P15-201ENST00000570019 1063 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 NF1P10-201ENST00000613227 742 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 AC005899.6-201ENST00000620729 297 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX3Q99909 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX3Q99909 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SSX3Q99909 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SSX3Q99909 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SSX3Q99909 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SSX3Q99909 MTCO1P25-201ENST00000414449 1799 ntBASIC5.6□□□□□ -1.51
SSX3Q99909 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX3Q99909 MTND5P23-201ENST00000430812 1655 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 PARP4P1-201ENST00000435945 2337 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX3Q99909 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 RNA5SP152-201ENST00000365184 110 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 SNORA70H-201ENST00000383910 135 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 SNORA70J-201ENST00000384182 135 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 AC098592.2-201ENST00000413158 265 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 VN1R31P-201ENST00000417498 730 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SSX3Q99909 PSMD8P1-201ENST00000436275 769 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 CYCSP51-201ENST00000443545 318 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX3Q99909 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX3Q99909 AC239798.3-201ENST00000454459 408 ntBASIC5.59□□□□□ -1.51
SSX3Q99909 RPSAP24-201ENST00000461543 873 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms