Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RPL7AP69-201ENST00000595306 806 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 MRPL57P1-201ENST00000621486 265 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 RAB28P4-201ENST00000622233 665 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC135068.11-201ENST00000636378 921 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AL161901.1-201ENST00000624954 3425 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 PARP4P1-201ENST00000435945 2337 ntBASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.38□□□□□ -1.23
CDK5RAP3Q96JB5 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 PPIAP24-201ENST00000328558 471 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 RNA5SP155-201ENST00000411154 129 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC006509.1-201ENST00000420788 634 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 LDHAP2-201ENST00000437325 985 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 RPS19P6-201ENST00000441327 433 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 RN7SL790P-201ENST00000474043 298 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 H3F3AP3-201ENST00000497682 407 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC117490.2-201ENST00000610042 594 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 U1.41-201ENST00000617626 165 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AP001264.1-201ENST00000620602 703 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AP002371.2-201ENST00000624450 503 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 AC073488.9-201ENST00000631601 754 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 CDY11P-201ENST00000447168 1651 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 SMG1P5-202ENST00000529428 4219 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 SMG1P2-201ENST00000566127 4221 ntBASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 FTO-203ENST00000460382 1517 ntTSL 5 BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CDK5RAP3Q96JB5 LINC01616-201ENST00000561816 2280 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC005332.9-201ENST00000620266 2921 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC010894.1-201ENST00000313760 361 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 RNA5SP308-201ENST00000362532 115 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 RNU1-5P-201ENST00000362684 144 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 RNU6-819P-201ENST00000364116 107 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 OR6K3-202ENST00000368146 996 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC026310.1-201ENST00000396004 378 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AL023284.3-201ENST00000407767 334 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 MIR1266-201ENST00000408125 84 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 Z85994.2-201ENST00000434327 452 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC003989.1-201ENST00000434569 565 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 AC234771.4-201ENST00000441416 730 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 HMGN1P32-201ENST00000441744 256 ntBASIC7.36□□□□□ -1.23
CDK5RAP3Q96JB5 MGAT2P1-201ENST00000449718 797 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms