Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC019257.2-201ENST00000605539 497 ntBASIC6.13□□□□□ -1.43
SNX3O60493 AC243830.3-201ENST00000616810 376 ntBASIC6.13□□□□□ -1.43
SNX3O60493 AC012100.3-201ENST00000624738 575 ntBASIC6.13□□□□□ -1.43
SNX3O60493 AC079776.5-201ENST00000641920 211 ntBASIC6.13□□□□□ -1.43
SNX3O60493 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 AC140479.2-201ENST00000421567 3130 ntBASIC6.13□□□□□ -1.43
SNX3O60493 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.13□□□□□ -1.43
SNX3O60493 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.13□□□□□ -1.43
SNX3O60493 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SNX3O60493 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
SNX3O60493 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX3O60493 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX3O60493 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SNX3O60493 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SNX3O60493 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
SNX3O60493 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SNX3O60493 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.12□□□□□ -1.43
SNX3O60493 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.12□□□□□ -1.43
SNX3O60493 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
SNX3O60493 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SNX3O60493 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SNX3O60493 VIM2P-201ENST00000402383 1294 ntBASIC6.12□□□□□ -1.43
SNX3O60493 SNORA77.2-201ENST00000408571 112 ntBASIC6.12□□□□□ -1.43
SNX3O60493 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX3O60493 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.12□□□□□ -1.43
SNX3O60493 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.12□□□□□ -1.43
SNX3O60493 AC099670.2-201ENST00000435130 321 ntBASIC6.12□□□□□ -1.43
SNX3O60493 RPSAP40-201ENST00000442343 891 ntBASIC6.12□□□□□ -1.43
SNX3O60493 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.12□□□□□ -1.43
SNX3O60493 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.12□□□□□ -1.43
SNX3O60493 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX3O60493 AL162739.1-201ENST00000450606 307 ntBASIC6.12□□□□□ -1.43
SNX3O60493 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX3O60493 SRP68P2-201ENST00000456184 254 ntBASIC6.12□□□□□ -1.43
SNX3O60493 RN7SL492P-201ENST00000460700 295 ntBASIC6.12□□□□□ -1.43
SNX3O60493 AC016489.1-201ENST00000461109 375 ntBASIC6.12□□□□□ -1.43
SNX3O60493 AC090602.1-201ENST00000469695 252 ntBASIC6.12□□□□□ -1.43
SNX3O60493 AC022730.1-201ENST00000473114 568 ntBASIC6.12□□□□□ -1.43
SNX3O60493 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.12□□□□□ -1.43
SNX3O60493 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.12□□□□□ -1.43
SNX3O60493 AC091917.2-201ENST00000505002 744 ntBASIC6.12□□□□□ -1.43
SNX3O60493 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.12□□□□□ -1.43
SNX3O60493 AC010442.1-201ENST00000515583 816 ntBASIC6.12□□□□□ -1.43
SNX3O60493 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX3O60493 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.12□□□□□ -1.43
SNX3O60493 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX3O60493 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SNX3O60493 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.12□□□□□ -1.43
SNX3O60493 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SNX3O60493 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.12□□□□□ -1.43
SNX3O60493 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX3O60493 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.12□□□□□ -1.43
SNX3O60493 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SNX3O60493 AC015849.6-201ENST00000605454 474 ntBASIC6.12□□□□□ -1.43
SNX3O60493 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.12□□□□□ -1.43
SNX3O60493 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.12□□□□□ -1.43
SNX3O60493 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.12□□□□□ -1.43
SNX3O60493 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.12□□□□□ -1.43
SNX3O60493 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX3O60493 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SNX3O60493 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 AL359091.1-201ENST00000449048 1734 ntBASIC6.11□□□□□ -1.43
SNX3O60493 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 AC078880.4-201ENST00000617627 1749 ntBASIC6.11□□□□□ -1.43
SNX3O60493 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SNX3O60493 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX3O60493 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 AP000473.2-201ENST00000602659 1537 ntBASIC6.11□□□□□ -1.43
SNX3O60493 AL353743.3-201ENST00000442109 1468 ntBASIC6.11□□□□□ -1.43
SNX3O60493 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX3O60493 AL034372.1-201ENST00000407586 754 ntBASIC6.11□□□□□ -1.43
SNX3O60493 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX3O60493 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SNX3O60493 AL139184.1-202ENST00000422303 222 ntBASIC6.11□□□□□ -1.43
SNX3O60493 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX3O60493 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX3O60493 NDUFB4P1-201ENST00000462398 381 ntBASIC6.11□□□□□ -1.43
SNX3O60493 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX3O60493 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX3O60493 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX3O60493 OR8Q1P-201ENST00000526467 655 ntBASIC6.11□□□□□ -1.43
SNX3O60493 HNRNPCP8-201ENST00000528764 888 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms